Ahmed, AM; Shimamoto, T and Shimamoto, T (2013). Molecular characterization of multidrug-resistant avian pathogenic Escherichia coli isolated from septicemic broilers. Int. J. Med. Microbiol., 303: 475-483.
Al-Kandari, F and Woodward, MJ (2019). Genotypic and phenotypic diversity differences of presumptive commensal and avian pathogenic E. coli. Br. Poult. Sci., 60: 79-86.
Al-Mir, H; Osman, M; Drapeau, A; Hamze, M; Madec, JY and Haenni, M (2021). WGS analysis of clonal and plasmidic epidemiology of colistin-resistance mediated by mcr genes in the poultry sector in Lebanon. Front. Microbiol., 12: 1-10.
Amin, MB; Sraboni, AS; Hossain, MI; Roy, S; Mozmader, TAU; Unicomb, L; Rousham, EK and Islam, MA (2020). Occurrence and genetic characteristics of mcr-1-positive colistin-resistant E. coli from poultry environments in Bangladesh. J. Glob. Antimicrob. Resist., 22: 546-552.
Azam, M; Ehsan, I; Sajjad-ur-Rahman; Saleemi, MK; Javed, MR and Mohsin, M (2017). Detection of the colistin resistance gene mcr-1 in avian pathogenic Escherichia coli in Pakistan. J. Glob. Antimicrob. Resist., 11: 152-153.
Badr, H; Samir, A; El-Tokhi, EI; Shahein, MA; Rady, FM; Hakim, AS; Fouad, EA; El-Sady, EF and Ali, SF (2022). Phenotypic and genotypic screening of colistin resistance associated with emerging pathogenic Escherichia coli isolated from poultry. Vet. Sci., 9: 1-10.
Barbieri, NL; Nielsen, DW; Wannemuehler, Y; Cavender, T; Hussein, A; Yan, SG; Nolan, LK and Logue, CM (2017). Mcr-1 identified in avian pathogenic Escherichia coli (APEC). PLoS One. 12: 1-13.
Berrazeg, M; Hadjadj, L; Ayad, A; Drissi, M and Rolain, JM (2016). First detected human case in Algeria of mcr-1 plasmid-mediated colistin resistance in a 2011 Escherichia coli isolate. Antimicrob. Agents Chemother., 60: 6996-6997.
Blanco, JE; Blanco, M; Mora, A and Blanco, J (1997). Prevalence of bacterial resistance to quinolones and other antimicrobials among avian Escherichia coli strains isolated from septicemic and healthy chickens in Spain. J. Clin. Microbiol., 35: 2184-2185.
Chaalal, N; Touati, A; Yahiaoui-Martinez, A; Aissa, M; Sotto, A; Lavigne, J and Pantel, A (2021). Colistin-resistant Enterobacterales isolated from chicken meat in Western Algeria. Microb. Drug Resist., 27: 991-1002.
Chabou, S; Leangapichart, T; Okdah, L; Le Page, S; Hadjadj, L and Rolain, JM (2016). Real-time quantitative PCR assay with Taqman® probe for rapid detection of MCR-1 plasmid-mediated colistin resistance. New Microbes New Infect., 13: 71-74.
Chabou, S; Leulmi, H and Rolain, JM (2019). Emergence of mcr-1-mediated colistin resistance in Escherichia coli isolates from poultry in Algeria. J. Glob. Antimicrob. Resist., 16: 115-116.
Chelaghma, W; Loucif, L; Bendjama, E; Cherak, Z; Bendahou, M and Rolain, JM (2022). Occurrence of extended spectrum cephalosporin-, carbapenem- and colistin-resistant gram-negative bacteria in fresh vegetables, an increasing human health concern in Algeria. Antibiotics. 11: 1-16.
CLSI (2012). Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically. Approved Standard, 9th Edn., CLSI document M07-A9.
CLSI (2018). M100 performance standards for antimicrobial susceptibility testing. In Clinical Laboratory Standards Institute. 28th Edn.
Cordoni, G; Woodward, MJ; Wu, H; Alanazi, M; Wallis, T and La Ragione, RM (2016). Comparative genomics of European avian pathogenic E. coli (APEC). BMC Genomics. 17: 1-21.
Dandachi, I; Chabou, S; Daoud, Z and Rolain, JM (2018). Prevalence and emergence of extended-spectrum cephalosporin-, carbapenem- and colistin-resistant gram negative bacteria of animal origin in the Mediterranean basin. Front. Microbiol., 9: 1-26.
Delicato, ER; de Brito, BG; Gaziri, LC and Vidotto, MC (2003). Virulence-associated genes in Escherichia coli isolates from poultry with colibacillosis. Vet. Microbiol., 94: 97-103.
De Oliveira, AL; Rocha, DA; Finkler, F; De Moraes, LB; Barbieri, NL; Pavanelo, DB; Winkler, C; Grassotti, TT; De Brito, KCT; De Brito, BG and Horn, F (2015). Prevalence of ColV plasmid-linked genes and in vivo pathogenicity of avian strains of Escherichia coli. Foodborne Pathog. Dis., 12: 679-685.
Dhaouadi, S; Soufi, L; Hamza, A; Fedida, D; Zied, C; Awadhi, E; Mtibaa, M; Hassen, B; Cherif, A; Torres, C; Abbassi, MS and Landolsi, RB (2020). Co-occurrence of mcr-1 mediated colistin resistance and β-lactamase-encoding genes in multidrug-resistant Escherichia coli from broiler chickens with colibacillosis in Tunisia. J. Glob. Antimicrob. Resist., 22: 538-545.
Dho-Moulin, M and Fairbrother, JM (1999). Avian pathogenic Escherichia coli (APEC). Vet. Res., 30: 299-316.
Dilhari, A; Sampath, A; Gunasekara, C; Fernando, N; Weerasekara, D; Sissons, C; McBain, A and Weerasekera, M (2017). Evaluation of the impact of six different DNA extraction methods for the representation of the microbial community associated with human chronic wound infections using a gel-based DNA profiling method. AMB Expr., 7: 1-11.
Drali, R; Berrazeg, M; Zidouni, LL; Hamitouche, F; Abbas, AA; Deriet, A and Mouffok, F (2018). Emergence of mcr-1 plasmid-mediated colistin-resistant Escherichia coli isolates from seawater. Sci. Total Environ., 642: 90-94.
Dziva, F and Stevens, MP (2008). Colibacillosis in poultry: Unravelling the molecular basis of virulence of avian pathogenic Escherichia coli in their natural hosts. Avian Pathol., 37: 355-366.
EUCAST (2022). The European Committee on Antimicrobial Susceptibility Testing. Breakpoint tables for interpretation of MICs and zone diameters. Version 12.0: 1-110.
Ewers, C; Antão, EM; Diehl, I; Philipp, HC and Wieler, LH (2009). Intestine and environment of the chicken as reservoirs for extraintestinal pathogenic Escherichia coli strains with zoonotic potential. Appl. Environ. Microbiol., 75: 184-192.
Halfaoui, Z; Menoueri, NM and Bendali, LM (2017). Serogrouping and antibiotic resistance of Escherichia coli isolated from broiler chicken with colibacillosis in center of Algeria. Vet. World. 10: 830-835.
Hayashi, W; Tanaka, H; Taniguchi, Y; Iimura, M; Soga, E; Kubo, R; Matsuo, N; Kawamura, K; Arakawa, Y; Nagano, Y and Naganoa, N (2019). Acquisition of mcr-1 and cocarriage of virulence genes in avian pathogenic Escherichia coli isolates from municipal wastewater influents in Japan. Appl. Environ. Microbiol., 85: 1-11.
Hoelzer, K; Wong, N; Thomas, J; Talkington, K; Jungman, E and Coukell, A (2017). Antimicrobial drug use in food-producing animals and associated human health risks: What, and how strong, is the evidence? BMC Vet. Res., 13: 1-38.
Johnson, TJ; Siek, KE; Johnson, SJ and Nolan, LK (2006). DNA sequence of a ColV plasmid and prevalence of selected plasmid-encoded virulence genes among avian Escherichia coli strains. J. Bacteriol., 188: 745-758.
Johnson, JR and Stell, AL (2000). Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise. J. Infect. Dis., 181: 261-272.
Johnson, TJ; Wannemuehler, Y; Doetkott, C; Johnson, SJ; Rosenberger, SC and Nolan, LK (2008). Identification of minimal predictors of avian pathogenic Escherichia coli virulence for use as a rapid diagnostic tool. J. Clin. Microbiol., 46: 3987-3996.
Kim, S; Woo, JH; Kim, N; Kim, MH; Kim, SY; Son, JH; Moon, DC; Lim, SK; Shin, M and Lee, JC (2019). Characterization of chromosome-mediated colistin resistance in Escherichia coli isolates from livestock in Korea. Infect. Drug Resist., 12: 3291-3299.
Liu, YY; Wang, Y; Walsh, TR; Yi, LX; Zhang, R; Spencer, J; Doi, Y; Tian, G; Dong, B; Huang, X; Yu, LF; Gu, D; Ren, H; Chen, X; Lv, L; He, D; Zhou, H; Liang, Z; Liu, JH and Shen, J (2016). Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: A microbiological and molecular biological study. Lancet Infect. Dis., 16: 161-168.
Loucif, L; Chelaghma, W; Bendjama, E; Cherak, Z; Khellaf, M; Khemri, A and Rolain, JM (2022). Detection of blaOXA-48 and mcr-1 genes in Escherichia coli isolates from pigeon (Columba livia) in Algeria. Microorganisms. 10: 1-11.
Magiorakos, A; Srinivasan, A; Carey, RB; Carmeli, Y; Falagas, ME; Giske, CG; Harbarth, S and Hindler, JF (2012). Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance. Clin. Microbiol. Infect., 18: 268-281.
Maturana, VG; Fernanda, deP; Camila, C; Pires, MM; de Campos, TA; Nakazato, G; Stheling, EG; Logue, MC; Nolan, LK and Wanderley, DdaS (2011). Subpathotypes of avian pathogenic Escherichia coli (APEC) exist as defined by their syndromes and virulence traits. Open Microbiol. J., 5: 55-64.
Mead, A; Billon-Lotz, C; Olsen, R; Swift, B; Richez, P; Stabler, R and Pelligand, L (2022). Epidemiological prevalence of phenotypical resistances and mobilised colistin resistance in avian commensal and pathogenic E. coli from Denmark, France, The Netherlands, and the UK. Antibiotics. 11: 1-16.
Meguenni, N; Chanteloup, N; Trotereau, A; Ahmed, CA; Bounar-Kechih, S and Schouler, C (2019). Virulence and antibiotic resistance profile of avian Escherichia coli strains isolated from colibacillosis lesions in central of Algeria. Vet. World. 12: 1840-1848.
Meguenni, N; Le Devendec, L; Jouy, E; Le Corvec, M; Bounar-Kechih, S; Bakour, R and Kempf, I (2015). First description of an extended-spectrum cephalosporin-and fluoroquinolone-resistant avian pathogenic Escherichia coli clone in Algeria. Avian Dis., 59: 20-23.
Mellata, M (2013). Human and avian extraintestinal pathogenic Escherichia coli: Infections, zoonotic risks, and antibiotic resistance trends. Foodborne Pathog. Dis., 10: 916-932.
Mohamed, L; Ge, Z; Yuehua, L; Yubin, G; Rachid, K; Mustapha, O; Junwei, W and Karine, O (2018). Virulence traits of avian pathogenic (APEC) and fecal (AFEC) E. coli isolated from broiler chickens in Algeria. Trop. Anim. Health Prod., 50: 547-553.
Olaitan, AO; Chabou, S; Okdah, L; Morand, S and Rolain, JM (2016). Dissemination of the mcr-1 colistin resistance gene. Lancet Infect. Dis., 16: 147.
Pourbakhsh, SA; Boulianne, M; Martineau-Doizé, B and Fairbrother, JM (1997). Virulence mechanisms of avian fimbriated Escherichia coli in experimentally inoculated chickens. Vet. Microbiol., 58: 195-213.
Radwan, IAE; Sayed, H; Salam, H and Abd-alwanis, SAA (2014). Frequency of some virulence associated genes among multidrug-resistant Escherichia coli isolated from septicemic broiler chicken. Int. J. Adv. Res., 2: 867-874.
Rebelo, AR; Bortolaia, V; Kjeldgaard, JS; Pedersen, SK; Leekitcharoenphon, P; Hansen, IM; Guerra, B; Malorny, B; Borowiak, M; Hammerl, JA; Battisti, A; Franco, A; Alba, P; Perrin-Guyomard, A; Granier, SA; de Frutos, C; De Frutos Escobar, C; Malhotra-Kumar, S; Villa, L; Carattoli, A and Hendriksen, RS (2018). Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes. Eurosurveillance. 23: 1-11.
Sarowska, J; Futoma-Koloch, B; Jama-Kmiecik, A; Frej-Madrzak, M; Ksiazczyk, M; Bugla-Ploskonska, G and Choroszy-Krol, I (2019). Virulence factors, prevalence and potential transmission of extraintestinal pathogenic Escherichia coli isolated from different sources: Recent reports. Gut Pathog., 11: 1-16.
Schouler, C; Schaeffer, B; Brée, A; Mora, A; Dahbi, G; Biet, F; Oswald, E; Mainil, J; Blanco, J and Moulin-Schouleur, M (2012). Diagnostic strategy for identifying avian pathogenic Escherichia coli based on four patterns of virulence genes. J. Clin. Microbiol., 50: 1673-1678.
Touati, M; Hadjadj, L; Berrazeg, M; Baron, SA and Rolain, JM (2020). Emergence of Escherichia coli harbouring mcr-1 and mcr-3 genes in North West Algerian farmlands. J. Glob. Antimicrob. Resist., 21: 132-137.
Touati, A and Mairi, A (2021). Plasmid-determined
colistin resistance in the north African countries: A systematic review. Microb. Drug Resist., 27: 121-133.
Varga, C; Brash, ML; Slavic, D; Boerlin, P; Ouckama, R; Weis, A; Petrik, M; Philippe, C; Barham, M and Guerin, MT (2018). Evaluating virulence-associated genes and antimicrobial resistance of avian pathogenic Escherichia coli isolates from broiler and broiler breeder chickens in Ontario, Canada. Avian Dis., 62: 291-299.
Vounba, P; Yaghouba, K; Ndiaye, C; Arsenault, J; Fairbrother, JM and Bada Alambédji, R (2018). Molecular characterization of Escherichia coli isolated from chickens with colibacillosis in Senegal. Foodborne Pathog. Dis., 15: 517-525.
Wang, C; Feng, Y; Liu, L; Wei, L; Kang, M and Zong, Z (2020). Identification of novel mobile colistin resistance gene mcr-10. Emerg. Microbes Infect., 9: 508-516.
Xu, X; Sun, Q and Zhao, L (2019). Virulence factors and antibiotic resistance of avian pathogenic Escherichia coli in eastern China. J. Vet. Res., 63: 317-320.
Yanat, B; Machuca, J; Yahia, RD; Touati, A; Pascual, Á and Rodríguez-Martínez, JM (2016). First report of the plasmid-mediated colistin resistance gene mcr-1 in a clinical Escherichia coli isolate in Algeria. Int. J. Antimicrob. Agents. 48: 760-761.
Zhu, XQ; Liu, YY; Wu, R; Xun, H; Sun, J; Li, J; Feng, Y and Liu, JH (2021). Impact of mcr-1 on the development of high level colistin resistance in Klebsiella pneumonia and Escherichia coli. Front. Microbiol., 12: 1-9.
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